Test Code SOFT: Z1000 Pyrimidine 5' Nucleotidase, Blood
Additional Codes
Ordering Mnemonic | Mayo Test ID |
---|---|
EPIC NAME: MISCELLANEOUS LAB TEST | P5NT |
EPIC CODE: LAB000 |
Reporting Name
Pyrimidine 5' Nucleotidase, BUseful For
Evaluation of marked basophilic stippling
Evaluation of hemolytic anemia
Method Name
Kinetic Spectrophotometry
Performing Laboratory
Mayo Clinic Laboratories in RochesterSpecimen Type
Whole Blood ACD-BSpecimen Required
Collection Container/Tube:
Preferred: Yellow top (ACD solution B)
Acceptable: Lavender top (EDTA)
Specimen Volume: 5 mL
Collection Instructions: Send whole blood specimen in original tube. Do not aliquot.
Specimen Minimum Volume
3 mL
Specimen Stability Information
Specimen Type | Temperature | Time | Special Container |
---|---|---|---|
Whole Blood ACD-B | Refrigerated | 20 days |
Reject Due To
Gross hemolysis | Reject |
Reference Values
Normal
Day(s) Performed
Monday through Friday
CPT Code Information
83915
LOINC Code Information
Test ID | Test Order Name | Order LOINC Value |
---|---|---|
P5NT | Pyrimidine 5' Nucleotidase, B | 2902-5 |
Result ID | Test Result Name | Result LOINC Value |
---|---|---|
2734 | Pyrimidine 5' Nucleotidase, B | 2902-5 |
Test Classification
This test was developed and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements. It has not been cleared or approved by the US Food and Drug Administration.Clinical Information
Pyrimidine 5' nucleotidases (P5'Ns) are catabolic enzymes that regulate cellular nucleotide and nucleoside levels through the dephosphorylation of noncyclic nucleoside 5'-monophosphates. P5'N activity is much higher in reticulocytes than in aged red blood cells due to increased demand during erythroid maturation. Reticulocyte ribosomal RNA degradation results in pyrimidine nucleotide residues that require conversion to nucleosides to allow diffusion outside the cell. Disruption of this process results in intracellular pyrimidine nucleotide accumulation visible as coarse basophilic stippling.
Several different 5'-nucleotidase enzymes have been identified with distinctive substrate specificity, cellular localization, and tissue distribution. Only P5'N type 1 is known to be associated with P5'N deficiency (also called uridine 5' monophosphate hydrolase deficiency), a cause of congenital nonspherocytic hemolytic anemia (OMIM 266120, autosomal recessive). The disorder manifests as mild/compensated to moderate hemolytic anemia with persistent reticulocytosis. Additional features include jaundice/neonatal hyperbilirubinemia, splenomegaly, and characteristic marked basophilic stippling on the peripheral blood smear. Coincident hemoglobin E may lead to a more severe hemolytic anemia.
P5'N deficiency is caused by homozygous or compound heterozygous alterations in the NT5C3A gene, mapped to chromosome 7p14. Assaying for the presence of pyrimidine nucleotides serves as a surrogate marker for P5'N deficiency and is not specific for a diagnosis of hereditary P5'N deficiency. Enzyme function is magnesium ion-dependent and is inhibited by metal chelating reagents, such as EDTA. Activity is inhibited by heavy metal ions including lead, mercury, copper, nickel, and cadmium, and toxic levels can cause accumulation of intracellular pyrimidine nucleotides.
Interpretation
A normal result indicates the absence of pyrimidine nucleotides and indicates normal pyrimidine 5' nucleotidase (P5'N) function.
An abnormal result (abnormal spectral scan) indicates the presence of pyrimidine nucleotides and possible P5'N deficiency. Enzyme activity is inhibited by heavy metal ions, including lead, mercury, copper, nickel, and cadmium. Toxic levels can cause accumulation of intracellular pyrimidine nucleotides. If results are abnormal clinical correlation is recommended to exclude heavy metal poisoning.
Cautions
This assay serves as a surrogate marker for decreased pyrimidine 5' nucleotidase (P5'N) activity from any cause and is not specific for a diagnosis of hereditary P5’N deficiency.
Enzyme activity is inhibited by metal chelating reagents, such as EDTA.
Since enzyme activity is inhibited by heavy metal ions (including lead, mercury, copper, nickel, and cadmium) and toxic levels can cause accumulation of intracellular pyrimidine nucleotides, clinical correlation to exclude heavy metal poisoning is indicated forabnormal results.
Recent transfusion can result in false negative results.
Clinical Reference
1. Rees DC, Duley JA, Marinaki AM. Pyrimidine 5' nucleotidase deficiency. Br J Haematol. 2003;120(3):375-383
2. Zanella A, Bianchi P, Fermo E, Valentini G. Hereditary pyrimidine 5'-nucleotidase deficiency: from genetics to clinical manifestations. Br J Haematol. 2006;133(2):113-123
3. Fairbanks VF, Klee GG. Biochemical aspects of hematology. In: Burtis CA, Ashwood ER, eds. Tietz Textbook of Clinical Chemistry. 3rd ed. WB Saunders; 1999:1642-1647
4. Gregg XT, Prchal JT. Red blood cell enzymopathies. In: Hoffman R, Benz, Jr EJ, et al, eds. Hematology : Basic Principles and Practice, 7th ed. Elsevier; 2018:616-625
5. Warang P, Colah R, Kedar P: Lead poisoning induced severe hemolytic anemia, basophilic stippling, mimicking erythrocyte pyrimidine 5'-nucleotidase deficiency in beta thalassemia minor. J Clin Toxicol. 2017;7(2):1000346. doi: 10.4172/2161-0495.1000346
Method Description
Pyrimidine nucleotides have a spectral absorption curve that is markedly different from that exhibited by (normally present) adenine nucleotides (eg, adenosine triphosphate). The former have a peak at about 270 nm; the latter at about 257 nm. Thus, pyrimidine 5' nucleotidase deficiency may be ascertained by demonstrating a very high spectral absorption maximum of 270 nm in erythrocyte extracts.(Beutler E: Red Cell Metabolism. A Manual of Biochemical Methods. 3rd ed. Grune and Stratton; 1984:100-102; van Solinge WW, van Wijk: Enzymes of the red blood cell. In: Rifai N, Horvath AR, Wittwer CT: eds. Tietz Textbook of Clinical Chemistry and Molecular Diagnostics. 6th ed. Elsevier; 2018:chap 30)
Report Available
10 daysSpecimen Retention Time
7 daysForms
If not ordering electronically, complete, print, and send a Benign Hematology Test Request Form (T755) with the specimen.